All annotated Motifs
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  1. Structured loop in cytochrome b A-F-[LMV]-G-Y-x(0,2)-V-x(1,3)-G-Q-M-S
    motif: A-F-[LMV]-G-Y-x(0,2)-V-x(1,3)-G-Q-M-S | false positive rate: 0.128205% | motiflength: 11 residues | occurences in Swiss-Prot TM: 1558 | occurences in Swiss-Prot GLOB: 2 | fragmentsize: 13 residues | region: Interface
  2. Putative helix-helix packing motif at the end of alpha-helices A-F-[MV]-G-[FY]
    motif: A-F-[MV]-G-[FY] | false positive rate: 5.10662% | motiflength: 5 residues | occurences in Swiss-Prot TM: 1691 | occurences in Swiss-Prot GLOB: 91 | fragmentsize: 8 residues | region: Interface
  3. Subunit interaction-associated motif in bacteriorhodopsin A-G-[AIV]-V-x-L-x(0,1)-I-x(2,3)-L-x-[FY]
    motif: A-G-[AIV]-V-x-L-x(0,1)-I-x(2,3)-L-x-[FY] | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 7 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Interface
  4. Proton translocation pathway motif A-R-Y-[AI]-D-W-[LM]-[FV]-T-T-P
    motif: A-R-Y-[AI]-D-W-[LM]-[FV]-T-T-P | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 8 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 11 residues | region: Helix Core
  5. Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 23 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Reentrant
  6. Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12 residues | region: Reentrant
  7. reentrant loop in voltage-gated chloride channels A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I
    motif: A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I | false positive rate: 0% | motiflength: 14 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Reentrant
  8. Membrane-water interface motif in cytochrome b F-F-G-V-x(2,3)-F
    motif: F-F-G-V-x(2,3)-F | false positive rate: 27.8351% | motiflength: 7 residues | occurences in Swiss-Prot TM: 70 | occurences in Swiss-Prot GLOB: 27 | fragmentsize: 10 residues | region: Interface
  9. Membrane-water interface motif in cytochrome b F-F-G-V-x-[AGT]-[FIM]
    motif: F-F-G-V-x-[AGT]-[FIM] | false positive rate: 14.8148% | motiflength: 7 residues | occurences in Swiss-Prot TM: 23 | occurences in Swiss-Prot GLOB: 4 | fragmentsize: 12 residues | region: Interface
  10. cytochrome c binding motif F-F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L-Y
    motif: F-F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L-Y | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 111 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Cytoplasm
  11. Cross-family motif at the end of alpha-helices F-x(3,4)-L-x(1,2)-L-[IL]-G
    motif: F-x(3,4)-L-x(1,2)-L-[IL]-G | false positive rate: 49.337% | motiflength: 9 residues | occurences in Swiss-Prot TM: 1108 | occurences in Swiss-Prot GLOB: 1079 | fragmentsize: 13 residues | region: Interface
  12. heme binding site in cytochrome c oxidase G-H-P-x-V-Y-x(1,3)-L-x(0,2)-P-[AGV]-[FY]
    motif: G-H-P-x-V-Y-x(1,3)-L-x(0,2)-P-[AGV]-[FY] | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 193 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13, 14 residues | region: Helix Core
  13. Cross-family motif at the end of alpha-helices G-L-Y-x-G
    motif: G-L-Y-x-G | false positive rate: 39.9521% | motiflength: 5 residues | occurences in Swiss-Prot TM: 1503 | occurences in Swiss-Prot GLOB: 1000 | fragmentsize: 12 residues | region: Interface
  14. Interface helix motif in subunit III of bc1 complex G-L-Y-Y-G-S-Y
    motif: G-L-Y-Y-G-S-Y | false positive rate: 0.219539% | motiflength: 7 residues | occurences in Swiss-Prot TM: 909 | occurences in Swiss-Prot GLOB: 2 | fragmentsize: 10, 12 residues | region: Interface
  15. Cross-family helix-helix interaction motif G-V-x(1,2)-L-[ILV]-[GL]-[TV]-[LV]-[LM]
    motif: G-V-x(1,2)-L-[ILV]-[GL]-[TV]-[LV]-[LM] | false positive rate: 2.20588% | motiflength: 9 residues | occurences in Swiss-Prot TM: 266 | occurences in Swiss-Prot GLOB: 6 | fragmentsize: 12 residues | region: Helix Core
  16. selectivity filter motif in water-glycerol transporters G-[AGT]-x-[FIM]-N-P-A-x-[ST]-[FI]-[AG]
    motif: G-[AGT]-x-[FIM]-N-P-A-x-[ST]-[FI]-[AG] | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 105 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 11 residues | region: Reentrant
  17. Membrane-water interface motif in photosynthetic reaction center G-[CGS]-[AG]-L-[FL]-x-A-x-H-G-[AS]-x-[IV]
    motif: G-[CGS]-[AG]-L-[FL]-x-A-x-H-G-[AS]-x-[IV] | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 22 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Interface
  18. cytochrome 'c1' subunit binding motif G-[FWY]-x-[ILM]-R-x-[ILM]-H-A-N-G-A-S
    motif: G-[FWY]-x-[ILM]-R-x-[ILM]-H-A-N-G-A-S | false positive rate: 0.0658762% | motiflength: 13 residues | occurences in Swiss-Prot TM: 1517 | occurences in Swiss-Prot GLOB: 1 | fragmentsize: 13 residues | region: Interface
  19. Proline-kink motif in cytochrome c and quinol oxidase G-[HY]-P-x-V-[WY]-[FI]
    motif: G-[HY]-P-x-V-[WY]-[FI] | false positive rate: 4.54545% | motiflength: 7 residues | occurences in Swiss-Prot TM: 210 | occurences in Swiss-Prot GLOB: 10 | fragmentsize: 7, 8 residues | region: Helix Core
  20. Cross-family irregular helix motif H-P-x-V-x(0,1)-Y-x(0,1)-I-[IL]-[IPV]-L
    motif: H-P-x-V-x(0,1)-Y-x(0,1)-I-[IL]-[IPV]-L | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 157 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12 residues | region: Helix Core
  21. Cross-family tilted helical motif L-G-A-[IPV]-[AIV]-x(3)-[ILV]-[FL]
    motif: L-G-A-[IPV]-[AIV]-x(3)-[ILV]-[FL] | false positive rate: 16.0839% | motiflength: 10 residues | occurences in Swiss-Prot TM: 120 | occurences in Swiss-Prot GLOB: 23 | fragmentsize: 10 residues | region: Helix Core
  22. Cross-family tilted helical motif L-G-A-[IV]-x(2)-[IM]-x(2)-[FI]
    motif: L-G-A-[IV]-x(2)-[IM]-x(2)-[FI] | false positive rate: 12.6214% | motiflength: 10 residues | occurences in Swiss-Prot TM: 180 | occurences in Swiss-Prot GLOB: 26 | fragmentsize: 10 residues | region: Interface
  23. Cardiolipin-binding motif in photosynthetic reaction center L-G-[ILM]-G-x-H-x(1,3)-A-x(0,2)-F
    motif: L-G-[ILM]-G-x-H-x(1,3)-A-x(0,2)-F | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 17 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Interface
  24. Helical motif in bacteriorhodopsins L-W-x-[AGI]-Y-P-[FIV]-[ILV]-W-[IL]-[ILV]-G
    motif: L-W-x-[AGI]-Y-P-[FIV]-[ILV]-W-[IL]-[ILV]-G | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 7 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12, 13 residues | region: Helix Core
  25. Proline-kink motif in bacteriorhodopsins L-W-x-[AG]-Y-P-[IV]-[LV]-W
    motif: L-W-x-[AG]-Y-P-[IV]-[LV]-W | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 12 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 9 residues | region: Helix Core