All motifs in the database (2228 entries)
order by false positive rate
order by motif's length
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  1. A-A-x(2,3)-A-P-L-[AT]-G-I-[ILV]
    motif: A-A-x(2,3)-A-P-L-[AT]-G-I-[ILV] | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12, 13 residues | region: Reentrant
  2. A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L
    motif: A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13, 14 residues | region: Reentrant
  3. A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
    motif: A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L-[FV] | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Reentrant
  4. Subunit interaction-associated motif in bacteriorhodopsin A-G-[AIV]-V-x-L-x(0,1)-I-x(2,3)-L-x-[FY]
    motif: A-G-[AIV]-V-x-L-x(0,1)-I-x(2,3)-L-x-[FY] | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 7 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Interface
  5. Proton translocation pathway motif A-R-Y-[AI]-D-W-[LM]-[FV]-T-T-P
    motif: A-R-Y-[AI]-D-W-[LM]-[FV]-T-T-P | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 8 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 11 residues | region: Helix Core
  6. A-x(0,1)-R-Y-[AI]-D-W-[ILM]-[FLV]-T-T-P-L
    motif: A-x(0,1)-R-Y-[AI]-D-W-[ILM]-[FLV]-T-T-P-L | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 9 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Helix Core
  7. A-x(0,1)-R-Y-[AI]-D-W-[ILM]-[FLV]-T-T-P-L-[IL]
    motif: A-x(0,1)-R-Y-[AI]-D-W-[ILM]-[FLV]-T-T-P-L-[IL] | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 9 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Helix Core
  8. A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]-[IL]
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]-[IL] | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Reentrant
  9. Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 23 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Reentrant
  10. A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-[ILV]
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-[ILV] | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 11 residues | region: Reentrant
  11. Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12 residues | region: Reentrant
  12. A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
    motif: A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV] | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Reentrant
  13. Reentrant motif at the voltage gated chloride channel dimer interface A-[AS]-[FV]-[NR]-A-P-L-[AT]-G-I
    motif: A-[AS]-[FV]-[NR]-A-P-L-[AT]-G-I | false positive rate: 0% | motiflength: 10 residues | occurences in Swiss-Prot TM: 23 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Reentrant
  14. A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]
    motif: A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT] | false positive rate: 0% | motiflength: 12 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12, 13, 14 residues | region: Reentrant
  15. A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
    motif: A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13, 14 residues | region: Reentrant
  16. reentrant loop in voltage-gated chloride channels A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I
    motif: A-[GL]-[LM]-[AS]-A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I | false positive rate: 0% | motiflength: 14 residues | occurences in Swiss-Prot TM: 19 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Reentrant
  17. D-W-[ILM]-[FLV]-T-T-P-L
    motif: D-W-[ILM]-[FLV]-T-T-P-L | false positive rate: 0% | motiflength: 8 residues | occurences in Swiss-Prot TM: 16 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 8, 9 residues | region: Helix Core
  18. D-W-[ILM]-[FLV]-T-T-P-L-[IL]
    motif: D-W-[ILM]-[FLV]-T-T-P-L-[IL] | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 15 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 9, 10 residues | region: Helix Core
  19. D-W-[ILM]-[FLV]-T-T-P-L-[IL]-[LV]
    motif: D-W-[ILM]-[FLV]-T-T-P-L-[IL]-[LV] | false positive rate: 0% | motiflength: 10 residues | occurences in Swiss-Prot TM: 15 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 10, 11, 12 residues | region: Helix Core
  20. Putative lipid binding helical motif across families F-A-x-F-L-[FIV]-[FI]-[ILV]
    motif: F-A-x-F-L-[FIV]-[FI]-[ILV] | false positive rate: 0% | motiflength: 8 residues | occurences in Swiss-Prot TM: 38 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 8, 9, 10 residues | region: Helix Core
  21. cytochrome c binding motif F-F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L-Y
    motif: F-F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L-Y | false positive rate: 0% | motiflength: 13 residues | occurences in Swiss-Prot TM: 111 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 14 residues | region: Cytoplasm
  22. F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L
    motif: F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L | false positive rate: 0% | motiflength: 11 residues | occurences in Swiss-Prot TM: 118 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12, 13, 14 residues | region: Cytoplasm
  23. Chlorophyll binding motif in photosystem I F-[LV]-G-x(0,2)-F-x(1,3)-G-[AL]-[FY]-V
    motif: F-[LV]-G-x(0,2)-F-x(1,3)-G-[AL]-[FY]-V | false positive rate: 0% | motiflength: 9 residues | occurences in Swiss-Prot TM: 126 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 13 residues | region: Interface
  24. Across families loop motif G-A-G-[FIV]-[IV]-[GP]-[LM]-[EGN]-I-x(0,1)-E
    motif: G-A-G-[FIV]-[IV]-[GP]-[LM]-[EGN]-I-x(0,1)-E | false positive rate: 0% | motiflength: 10 residues | occurences in Swiss-Prot TM: 8 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 11 residues | region: Interface
  25. Water-membrane interface motif in cytochrome c and quinol oxidases G-G-F-G-N-[WY]-[FL]-[MV]
    motif: G-G-F-G-N-[WY]-[FL]-[MV] | false positive rate: 0% | motiflength: 8 residues | occurences in Swiss-Prot TM: 122 | occurences in Swiss-Prot GLOB: 0 | fragmentsize: 12, 13 residues | region: Interface