- 4 iron, 4 sulfur cluster binding
A-x-G-x-[ILM]-[FI]-L-[FI]
L-[IL]-[CGSV]-G-[IV]-[APV]-x(3)-[AIV]
L-[IV]-x-[LV]-x-G-x-L
L-x-G-x(2)-G-[ILV]-x(2)-[LV]
- aerobic respiration
A-G-x(2)-G-[GTV]-[ALV]-[FL]
A-x-G-x-[ILM]-[FI]-L-[FI]
A-x-[AIL]-[IL]-[LV]-L-[AST]-L-x-[IV]-[FIL]
cytochrome c binding motif F-F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L-Y
F-x-[FV]-x(3)-V-G-G-[ILMV]-x-G
F-[DQ]-P-[AS]-G-G-G-D-P-[IV]-L
Water-membrane interface motif in cytochrome c and quinol oxidases G-G-F-G-N-[WY]-[FL]-[MV]
G-H-P-x-V-Y-[FI]-x-[ILV]-L
G-x-T-G-x(0,1)-V-x(0,1)-L-x(2)-[ASV]-[PS]-[GILV]-[ADV]
Proline-kink motif in cytochrome c and quinol oxidase G-[HY]-P-x-V-[WY]-[FI]
Cross-family irregular helix motif H-P-x-V-x(0,1)-Y-x(0,1)-I-[IL]-[IPV]-L
Bent helical motif at the membrane-water interface in cytochrome c and quinol oxidases I-L-G-A-[IV]-x(2)-[IP]-[TV]
L-P-[AGILV]-[FL]-G-[AIV]-x-[ES]-[EHK]
P-x-V-x(0,1)-Y-x(0,1)-I-[IL]-[ILPV]
P-x-V-x(0,1)-Y-x(0,1)-I-[IL]-[IPV]-L
Loop motif in cytochrome c and quinol oxidases P-[AS]-G-G-G-D-P-[IV]
W-x(1,3)-H-P-x-V-Y-[FI]-x-[ILV]-L-P
V-x(2,3)-I-x(0,1)-L-x-[AG]-[FIV]-G
V-G-G-[ILMV]-[TV]-[AG]
V-G-G-[ILMV]-[TV]-[AG]-[AIV]
V-G-G-[ILMV]-x-G
Across families helix-helix packing motif V-G-x-L-[ACTV]-[AGT]-[IL]-[AGV]
Across families TrpPhe kink motif W-L-F-[ST]
W-L-F-x(0,1)-T
heme-copper binding site in cytochrome c and quinol oxidases W-x(2)-G-H-P-x-V-Y-[FI]-x-[ILV]-L
W-x(2)-G-H-P-x-V-Y-x(1,3)-L
Y-x(1,2)-I-x(0,1)-L-P-[AGLV]-F
V-x(0,1)-Y-x(0,1)-I-[IL]-[IPV]-L
L-[FLV]-L-L-[DSV]-L
P-P-L-[AST]-[GTV]
L-[ILV]-x-L-x-L-[APV]-x(2)-[AILV]-x-[AGL]
P-[AES]-[AGT]-x-G-D
P-[AES]-x-G-G-[CD]
P-[AGILV]-[FL]-G-[AIV]-x-[ES]-[EHK]
P-[AS]-G-G-G-D-P
P-[AT]-G-[IV]-x(2)-[FY]
P-[AT]-G-x(0,1)-K-x(1,2)-F
P-[ET]-V-x-I
P-[LV]-x-[ILM]-G-[AS]-x-[DG]-x-A-F-P
Q-x-F-L-G
L-[IL]-x-L-x-[ILV]-x-V-x(0,1)-A
L-[IM]-x-[LPV]-G-x-G
L-[IP]-x-L-A-x(0,2)-A-x(0,2)-T
L-[GP]-[ALV]-[ALV]-A-x-[AEGT]-[AI]-x-[LMV]
L-[ILV]-L-L-[ADSV]-L-[APS]
L-x-S-G-x(0,1)-T-x(0,1)-L-[DEN]
L-P-[ALV]-x-A-x(2,3)-T-x(1,2)-L
Cross-family tilted helical motif L-G-A-[IV]-x(2)-[IM]-x(2)-[FI]
L-G-x-I-[NR]-x-[IV]
L-x-[AT]-[FILV]-G-F
L-x-[AT]-[FIL]-G-F
- antibiotic transport
L-[IMV]-[FV]-[GLPV]-G-x-G
- antibiotic transporter activity
L-[IMV]-[FV]-[GLPV]-G-x-G
- antiporter activity
A-A-x(2,3)-A-P-L-[AT]-G-I
A-A-x(2,3)-A-P-L-[AT]-G-I-[ILV]
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]-[IL]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
Reentrant motif at the voltage gated chloride channel dimer interface A-[AS]-[FV]-[NR]-A-P-L-[AT]-G-I
A-[AS]-[FIV]-[NR]-A-P
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-[ILV]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
- apoptosis
Bent alpha-helix motif in G protein coupled receptors L-[ALV]-F-[FM]-[AV]-x-D-V-x(2,3)-K-x(0,1)-G
- ATP binding
L-[IMV]-[FV]-[GLPV]-G-x-G
L-[NQS]-A-[FIV]-x-F-x(2)-L
- ATP synthesis coupled electron transport
A-x(0,1)-L-F-x-[NTV]-x-[QST]-[IL]
F-x(0,1)-V-G-[FW]-x-G-[IV]
P-P-L-[AST]-[GTV]
- ATPase activity
L-[IMV]-[FV]-[GLPV]-G-x-G
Cross-family tilted helical motif L-G-A-[IV]-x(2)-[IM]-x(2)-[FI]
L-x-[FILM]-G-x-L-x(2)-L-[IV]-x-[AST]
- ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
L-[NQS]-A-[FIV]-x-F-x(2)-L
L-[ANQS]-A-[FIV]-x-F-x(2)-[FL]
- ATPase activity, coupled to transmembrane movement of substances
L-x-[FILM]-G-x-L-x(2)-L-[IV]-x-[AST]
- bacteriochlorophyll binding
A-L-x-[FILM]-x-G-x-[LM]-[FIV]-[LV]
Membrane-water interface motif in cytochrome b F-F-G-V-x-[AGT]-[FIM]
F-x(0,1)-V-G-[FW]-x-G-[IV]
G-x(3)-G-[ADT]-L-[AGS]-[FI]-x(3)-G
Carotene binding motif in photosynthetic reaction center proteins P-L-x-[DEK]-G-G-x-W-x(2)-[AI]-[GST]
V-[AG]-P-x(0,2)-V-x(1,2)-F-F
P-L-x-[DEK]-G-G-x(0,1)-W-x(2)-[AI]
Pi-helical lipid binding motif in bacterial phtosystem II P-L-[DEK]-G-G-x(0,1)-W-x(2)-[AI]-[AGST]-[FILV]
P-L-x-[DEK]-G-G-x-W-x(2)-[AI]-[GST]-[FILV]
P-x-G-I-x-[PST]-[DH]-[ILV]-D
Chlorophyll binding loop motif in photosynthetic reaction center proteins L-x(1,2)-F-x(0,1)-R-P-[ILV]-[LM]-[LM]-G-[AS]-W
Cardiolipin-binding motif in photosynthetic reaction center L-G-[ILM]-G-x-H-x(1,3)-A-x(0,2)-F
L-G-[ILM]-G-x-H-x(2,4)-F
Across families loop motif L-G-[ILM]-G-x-H-x-[AP]
L-G-[ILM]-[GS]-x-H-x(1,3)-A-x(0,2)-F
- binding
Bent alpha-helix motif in G protein coupled receptors L-[ALV]-F-[FM]-[AV]-x-D-V-x(2,3)-K-x(0,1)-G
- calcium ion binding
L-[FV]-x-[AG]-x-A-x-[ATV]-x(2)-L
- carbohydrate transport
A-x(2)-[AGST]-[ILM]-F-x-G-I
- catalytic activity
L-[NQS]-A-[FIV]-x-F-x(2)-L
L-[ANQS]-A-[FIV]-x-F-x(2)-[FL]
- cell adhesion
L-[FV]-x-[AG]-x-A-x-[ATV]-x(2)-L
- cell cycle
L-[AC]-x-G-[GPT]-x-L
- cell division
L-[AC]-x-G-[GPT]-x-L
- cell wall organization and biogenesis
V-I-[FIMV]-G-[AST]
L-[AC]-x-G-[GPT]-x-L
- channel or pore class transporter activity
A-[LV]-[AGT]-x-[ALV]-[FILV]-G-x(0,1)-A-x(0,1)-F
- chloride ion binding
A-A-x(2,3)-A-P-L-[AT]-G-I
A-A-x(2,3)-A-P-L-[AT]-G-I-[ILV]
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]-[IL]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
Reentrant motif at the voltage gated chloride channel dimer interface A-[AS]-[FV]-[NR]-A-P-L-[AT]-G-I
V-L-W-x-[AG]-Y
Proline kink motif in bacteriorhodopsins V-L-W-x-[AG]-Y-P
V-L-W-x-[AG]-Y-P-[IV]
A-[AS]-[FIV]-[NR]-A-P
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-[ILV]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
L-W-x-[AGI]-Y-P
L-W-x-[AGI]-Y-P-[FIV]
L-W-x-[AG]-Y-P
- chloride transport
A-A-x(2,3)-A-P-L-[AT]-G-I
A-A-x(2,3)-A-P-L-[AT]-G-I-[ILV]
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L
A-A-x(2,3)-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
A-P-L-[AT]-G
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]-[IL]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G
Reentrant motif at the voltage gated chloride channel dimer interface A-[AS]-[FV]-[NR]-A-P-L-[AT]-G-I
A-[LV]-[AGT]-x-[ALV]-[FILV]-G-x(0,1)-A-x(0,1)-F
A-x-[GIV]-[AIV]-G-x-[AGILV]-[ANTV]-G-[IL]
A-[AS]-[FIV]-[NR]-A-P
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-[ILV]
Reentrant loop in voltage-gated chloride channels A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L
A-[AS]-[FIV]-[NR]-A-P-L-[AT]-G-I-x(0,1)-L-[FV]
Cross-family helix-helix packing motif P-[ATV]-V-[QR]-x-G-[GL]-[NQR]-x-G
L-[GN]-[IM]-[EQ]-[DT]-L-[AL]-[FH]-x-V
L-x-L-x-L-x-L-[GV]-I
- chlorophyll binding
A-x-[ALV]-[GI]-[FH]-G-x-[GIV]
A-x-[FLV]-F-F-x-A
L-x-G-x-L-x(2)-A-x(2)-[AGP]-x-[ADG]
L-x(3)-A-x-[LV]-[AGI]-[FL]-G
- chloroplast
A-x-G-x-[ILM]-[FI]-L-[FI]
A-x-H-G-A-x-[FIV]
R-[EQ]-x-E-x(2,3)-R-x(0,1)-L-G-[IM]
V-x-G-x(2)-[GIL]-G-[AS]-L
W-L-[AG]-[IL]-G-[AST]
L-[FM]-[GIL]-[AL]-G-x-[IL]
L-[FY]-[GIV]-A-G
L-[IL]-[CGSV]-G-[IV]-[APV]-x(3)-[AIV]
Across families membrane-water interface helix motif R-[EQ]-x-E-x(2,3)-R-x(0,1)-L-G
L-[IV]-x-[LV]-x-G-x-L
L-[LM]-x-A-x(2)-G-A-[TV]-[ILV]
L-x-G-x(2)-G-[ILV]-x(2)-[LV]
L-x-G-x-L-x(2)-A-x(2)-[AGP]-x-[ADG]
L-x(2)-G-G-x-[WY]-x(2)-[AI]
L-x-[AIV]-x-G-x-L-[FY]
Cross-family tilted alpha-helix motif L-x-[AIV]-x-[HW]-G-A-T
L-x(3)-G-x-L-[FIV]-[LV]-x-[ATV]